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Protein data
function: electron transporterexperiment: X-RAY DIFFRACTION
resolution: 3.2 Å
axial ligand #1: HIS
chainID: J,resSeq: 111,
Coordination distance[Å]: 1.998
molecule: Cytochrome b
Organism: Rhodobacter sphaeroides
axial ligand #2: HIS
chainID: J,resSeq: 212,
Coordination distance[Å]: 2.007
molecule: same as ligand #1
List of other hemes in pdb:2fyn
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
2fyn-A-501 |
sad. -0.46 ruf. -0.47 dom. +0.17 bre. -0.06 |
HIS | chainID: A, resSeq: 111, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 388.0 Å3 d(Fe-oop): 0.020 Å |
| HIS | chainID: A, resSeq: 212, molecule: Cytochrome b |
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2fyn-A-502 |
sad. +0.11 ruf. -0.31 dom. -0.02 bre. +0.06 |
HIS | chainID: A, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 409.0 Å3 d(Fe-oop): 0.015 Å |
| HIS | chainID: A, resSeq: 198, molecule: Cytochrome b |
|||
2fyn-B-301 |
sad. -0.17 ruf. -0.34 dom. -0.07 bre. +0.13 |
HIS | chainID: B, resSeq: 40, molecule: Cytochrome c1 |
electron transporter oligomeric count: 6 pocket vol.: 431.0 Å3 d(Fe-oop): 0.115 Å |
| MET | chainID: B, resSeq: 185, molecule: Cytochrome c1 |
|||
2fyn-D-501 |
sad. -0.34 ruf. -0.36 dom. +0.24 bre. -0.03 |
HIS | chainID: D, resSeq: 111, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 370.0 Å3 d(Fe-oop): 0.061 Å |
| HIS | chainID: D, resSeq: 212, molecule: Cytochrome b |
|||
2fyn-D-502 |
sad. +0.13 ruf. -0.14 dom. -0.17 bre. +0.02 |
HIS | chainID: D, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 410.0 Å3 d(Fe-oop): 0.003 Å |
| HIS | chainID: D, resSeq: 198, molecule: Cytochrome b |
|||
2fyn-E-301 |
sad. -0.07 ruf. -0.14 dom. -0.11 bre. +0.00 |
HIS | chainID: E, resSeq: 40, molecule: Cytochrome c1 |
electron transporter oligomeric count: 6 pocket vol.: 430.0 Å3 d(Fe-oop): 0.098 Å |
| MET | chainID: E, resSeq: 185, molecule: Cytochrome c1 |
|||
2fyn-G-501 |
sad. -0.45 ruf. -0.26 dom. +0.32 bre. -0.07 |
HIS | chainID: G, resSeq: 111, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 380.0 Å3 d(Fe-oop): 0.033 Å |
| HIS | chainID: G, resSeq: 212, molecule: Cytochrome b |
|||
2fyn-G-502 |
sad. +0.35 ruf. -0.22 dom. -0.07 bre. +0.12 |
HIS | chainID: G, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 410.0 Å3 d(Fe-oop): 0.022 Å |
| HIS | chainID: G, resSeq: 198, molecule: Cytochrome b |
|||
2fyn-H-301 |
sad. -0.09 ruf. -0.32 dom. -0.12 bre. +0.07 |
HIS | chainID: H, resSeq: 40, molecule: Cytochrome c1 |
electron transporter oligomeric count: 6 pocket vol.: 395.0 Å3 d(Fe-oop): 0.021 Å |
| MET | chainID: H, resSeq: 185, molecule: Cytochrome c1 |
|||
2fyn-J-502 |
sad. -0.01 ruf. -0.23 dom. -0.03 bre. +0.02 |
HIS | chainID: J, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 413.0 Å3 d(Fe-oop): 0.025 Å |
| HIS | chainID: J, resSeq: 198, molecule: Cytochrome b |
|||
2fyn-K-301 |
sad. +0.02 ruf. -0.35 dom. -0.18 bre. -0.02 |
HIS | chainID: K, resSeq: 40, molecule: Cytochrome c1 |
electron transporter oligomeric count: 6 pocket vol.: 407.0 Å3 d(Fe-oop): 0.019 Å |
| MET | chainID: K, resSeq: 185, molecule: Cytochrome c1 |
|||
2fyn-M-501 |
sad. -0.44 ruf. -0.29 dom. +0.20 bre. -0.13 |
HIS | chainID: M, resSeq: 111, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 388.0 Å3 d(Fe-oop): 0.023 Å |
| HIS | chainID: M, resSeq: 212, molecule: Cytochrome b |
|||
2fyn-M-502 |
sad. +0.14 ruf. -0.45 dom. -0.18 bre. +0.02 |
HIS | chainID: M, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 424.0 Å3 d(Fe-oop): 0.015 Å |
| HIS | chainID: M, resSeq: 198, molecule: Cytochrome b |
|||
2fyn-N-301 |
sad. -0.18 ruf. -0.23 dom. +0.02 bre. -0.03 |
HIS | chainID: N, resSeq: 40, molecule: Cytochrome c1 |
electron transporter oligomeric count: 6 pocket vol.: 433.0 Å3 d(Fe-oop): 0.052 Å |
| MET | chainID: N, resSeq: 185, molecule: Cytochrome c1 |
|||
2fyn-P-501 |
sad. -0.34 ruf. -0.27 dom. +0.19 bre. -0.04 |
HIS | chainID: P, resSeq: 111, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 373.0 Å3 d(Fe-oop): 0.044 Å |
| HIS | chainID: P, resSeq: 212, molecule: Cytochrome b |
|||
2fyn-P-502 |
sad. -0.00 ruf. +0.08 dom. +0.02 bre. +0.03 |
HIS | chainID: P, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 420.0 Å3 d(Fe-oop): 0.044 Å |
| HIS | chainID: P, resSeq: 198, molecule: Cytochrome b |
|||
2fyn-Q-301 |
sad. -0.01 ruf. -0.12 dom. -0.18 bre. +0.01 |
HIS | chainID: Q, resSeq: 40, molecule: Cytochrome c1 |
electron transporter oligomeric count: 6 pocket vol.: 431.0 Å3 d(Fe-oop): 0.078 Å |
| MET | chainID: Q, resSeq: 185, molecule: Cytochrome c1 |
|||