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PyDISH No: 03589

PDB: 2ffn,
chainID: A, resSeq: 1002
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.8 Å

axial ligand #1: HIS

chainID: A,
resSeq: 35,
Coordination distance[Å]: 1.98
molecule: Cytochrome c3
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'

axial ligand #2: HIS

chainID: A,
resSeq: 52,
Coordination distance[Å]: 1.978
molecule: same as ligand #1

List of other hemes in pdb:2ffn

ID of heme Distortion Axial ligands on heme Function & structure
2ffn-A-1004
sad. +1.07
ruf. +0.18
dom. +0.07
bre. -0.17
HIS chainID: A,
resSeq: 70,
molecule: Cytochrome c3
electron transporter
oligomeric count: 1
pocket vol.: 384.0 Å3
d(Fe-oop): 0.003 Å
HIS chainID: A, resSeq: 106,
molecule: Cytochrome c3
2ffn-A-1001
sad. +0.10
ruf. -0.60
dom. -0.18
bre. -0.23
HIS chainID: A,
resSeq: 22,
molecule: Cytochrome c3
electron transporter
oligomeric count: 1
pocket vol.: 459.0 Å3
d(Fe-oop): 0.042 Å
HIS chainID: A, resSeq: 34,
molecule: Cytochrome c3
2ffn-A-1003
sad. +0.05
ruf. -0.16
dom. -0.07
bre. -0.28
HIS chainID: A,
resSeq: 25,
molecule: Cytochrome c3
electron transporter
oligomeric count: 1
pocket vol.: 490.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: A, resSeq: 83,
molecule: Cytochrome c3