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PyDISH No: 03553

PDB: 2ewk,
chainID: A, resSeq: 1003
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.0 Å

axial ligand #1: HIS

chainID: A,
resSeq: 25,
Coordination distance[Å]: 1.98
molecule: Cytochrome c3
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'

axial ligand #2: HIS

chainID: A,
resSeq: 83,
Coordination distance[Å]: 1.973
molecule: same as ligand #1

List of other hemes in pdb:2ewk

ID of heme Distortion Axial ligands on heme Function & structure
2ewk-A-1004
sad. +1.09
ruf. +0.25
dom. +0.04
bre. +0.04
HIS chainID: A,
resSeq: 70,
molecule: Cytochrome c3
electron transporter
oligomeric count: 1
pocket vol.: 383.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: A, resSeq: 106,
molecule: Cytochrome c3
2ewk-A-1002
sad. +0.02
ruf. -0.88
dom. -0.06
bre. +0.04
HIS chainID: A,
resSeq: 35,
molecule: Cytochrome c3
electron transporter
oligomeric count: 1
pocket vol.: 480.0 Å3
d(Fe-oop): 0.012 Å
HIS chainID: A, resSeq: 52,
molecule: Cytochrome c3
2ewk-A-1001
sad. +0.14
ruf. -0.84
dom. -0.18
bre. +0.00
HIS chainID: A,
resSeq: 22,
molecule: Cytochrome c3
electron transporter
oligomeric count: 1
pocket vol.: 465.0 Å3
d(Fe-oop): 0.031 Å
HIS chainID: A, resSeq: 34,
molecule: Cytochrome c3