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PyDISH No: 03488

PDB: 2e81,
chainID: A, resSeq: 1508
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.0 Å

axial ligand #1: LYS

chainID: A,
resSeq: 134,
Coordination distance[Å]: 2.127
molecule: Cytochrome c-552
EC number: 1.7.2.2
Organism: Wolinella succinogenes

axial ligand #2: HOA

chainID: A,
resSeq: 704,
Coordination distance[Å]: 1.706
molecule: HYDROXYAMINE

List of other hemes in pdb:2e81

ID of heme Distortion Axial ligands on heme Function & structure
2e81-A-1509
 sad. +0.77
ruf. -0.71
dom. -0.11
bre. -0.05
 HIS chainID: A,
resSeq: 172,
molecule: Cytochrome c-552		 oxidoreductase
oligomeric count: 2
pocket vol.: 437.0 Å3
d(Fe-oop): 0.027 Å
HIS chainID: A, resSeq: 313,
molecule: Cytochrome c-552
2e81-A-1510
 sad. -0.37
ruf. -0.88
dom. -0.02
bre. +0.07
 HIS chainID: A,
resSeq: 102,
molecule: Cytochrome c-552		 oxidoreductase
oligomeric count: 2
pocket vol.: 394.0 Å3
d(Fe-oop): 0.020 Å
HIS chainID: A, resSeq: 215,
molecule: Cytochrome c-552
2e81-A-1511
 sad. +0.11
ruf. -0.99
dom. +0.20
bre. +0.12
 HIS chainID: A,
resSeq: 299,
molecule: Cytochrome c-552		 oxidoreductase
oligomeric count: 2
pocket vol.: 438.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: A, resSeq: 405,
molecule: Cytochrome c-552
2e81-A-1512
 sad. +0.24
ruf. -0.73
dom. -0.02
bre. -0.01
 HIS chainID: A,
resSeq: 288,
molecule: Cytochrome c-552		 oxidoreductase
oligomeric count: 2
pocket vol.: 535.0 Å3
d(Fe-oop): 0.022 Å
HIS chainID: A, resSeq: 330,
molecule: Cytochrome c-552