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PyDISH No: 03437

PDB: 2dge,
chainID: A, resSeq: 200
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.5 Å

axial ligand #1: HIS

chainID: A,
resSeq: 90,
Coordination distance[Å]: 1.968
molecule: Cytochrome c6
Organism: Arabidopsis thaliana

axial ligand #2: MET

chainID: A,
resSeq: 130,
Coordination distance[Å]: 2.312
molecule: same as ligand #1

List of other hemes in pdb:2dge

ID of heme Distortion Axial ligands on heme Function & structure
2dge-B-200
 sad. +0.45
ruf. -0.46
dom. -0.08
bre. -0.18
 HIS chainID: B,
resSeq: 90,
molecule: Cytochrome c6		 electron transporter
oligomeric count: 4
pocket vol.: 397.0 Å3
d(Fe-oop): 0.040 Å
MET chainID: B, resSeq: 130,
molecule: Cytochrome c6
2dge-C-200
 sad. +0.30
ruf. -0.39
dom. -0.09
bre. -0.17
 HIS chainID: C,
resSeq: 90,
molecule: Cytochrome c6		 electron transporter
oligomeric count: 4
pocket vol.: 395.0 Å3
d(Fe-oop): 0.025 Å
MET chainID: C, resSeq: 130,
molecule: Cytochrome c6
2dge-D-200
 sad. +0.25
ruf. -0.48
dom. -0.11
bre. -0.19
 HIS chainID: D,
resSeq: 90,
molecule: Cytochrome c6		 electron transporter
oligomeric count: 4
pocket vol.: 361.0 Å3
d(Fe-oop): 0.025 Å
MET chainID: D, resSeq: 130,
molecule: Cytochrome c6