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PyDISH No: 03420

PDB: 2d2n,
chainID: B, resSeq: 200
heme type: B

distortion

Protein data

function: oxygen carrier
experiment: X-RAY DIFFRACTION
resolution: 3.2 Å
origomeric count: 24

axial ligand #1: HIS

chainID: B,
resSeq: 94,
Coordination distance[Å]: 1.991
molecule: Giant hemoglobin, A2(a5) globin chain
Organism: Oligobrachia mashikoi

axial ligand #2: OXY

chainID: B,
resSeq: 1201,
Coordination distance[Å]: 1.793
molecule: OXYGEN MOLECULE

List of other hemes in pdb:2d2n

ID of heme Distortion Axial ligands on heme Function & structure
2d2n-A-200
sad. +0.06
ruf. -0.47
dom. -0.21
bre. -0.27
HIS chainID: A,
resSeq: 94,
molecule: Giant hemoglobin, A1(b) globin chain
oxygen carrier
oligomeric count: 24
pocket vol.: 568.0 Å3
d(Fe-oop): 0.102 Å
OXY chainID: A, resSeq: 201,
molecule: OXYGEN MOLECULE
2d2n-C-200
sad. -0.06
ruf. -0.40
dom. -0.31
bre. -0.23
HIS chainID: C,
resSeq: 98,
molecule: Giant hemoglobin, B2(c) globin chain
oxygen carrier
oligomeric count: 24
pocket vol.: 453.0 Å3
d(Fe-oop): 0.130 Å
OXY chainID: C, resSeq: 2201,
molecule: OXYGEN MOLECULE
2d2n-D-200
sad. -0.28
ruf. -0.36
dom. -0.35
bre. -0.30
HIS chainID: D,
resSeq: 96,
molecule: Giant hemoglobin, B1(d) globin chain
oxygen carrier
oligomeric count: 24
pocket vol.: 558.0 Å3
d(Fe-oop): 0.134 Å
OXY chainID: D, resSeq: 3201,
molecule: OXYGEN MOLECULE