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PyDISH No: 03418

PDB: 2d2m,
chainID: D, resSeq: 200
heme type: B

distortion

Protein data

function: oxygen carrier
experiment: X-RAY DIFFRACTION
resolution: 2.85 Å

axial ligand #1: HIS

chainID: D,
resSeq: 96,
Coordination distance[Å]: 2.015
molecule: Giant hemoglobin, B1(d) globin chain
Organism: Oligobrachia mashikoi

axial ligand #2: OXY

chainID: D,
resSeq: 3201,
Coordination distance[Å]: 1.799
molecule: OXYGEN MOLECULE

List of other hemes in pdb:2d2m

ID of heme	Distortion	Axial ligands on heme		Function & structure
2d2m-A-200	`sad. +0.16 ruf. -0.60 dom. -0.32 bre. -0.23`	HIS	chainID: A, resSeq: 94, molecule: Giant hemoglobin, A1(b) globin chain	oxygen carrier oligomeric count: 24 pocket vol.: 555.0 Å³ d(Fe-oop): 0.110 Å
2d2m-A-200	`sad. +0.16 ruf. -0.60 dom. -0.32 bre. -0.23`	OXY	chainID: A, resSeq: 201, molecule: OXYGEN MOLECULE
2d2m-B-200	`sad. +0.04 ruf. -0.10 dom. -0.19 bre. -0.26`	HIS	chainID: B, resSeq: 94, molecule: Giant hemoglobin, A2(a5) globin chain	oxygen carrier oligomeric count: 24 pocket vol.: 532.0 Å³ d(Fe-oop): 0.105 Å
2d2m-B-200	`sad. +0.04 ruf. -0.10 dom. -0.19 bre. -0.26`	OXY	chainID: B, resSeq: 1201, molecule: OXYGEN MOLECULE
2d2m-C-200	`sad. -0.05 ruf. -0.01 dom. -0.17 bre. -0.28`	HIS	chainID: C, resSeq: 98, molecule: Giant hemoglobin, B2(c) globin chain	oxygen carrier oligomeric count: 24 pocket vol.: 470.0 Å³ d(Fe-oop): 0.122 Å
2d2m-C-200	`sad. -0.05 ruf. -0.01 dom. -0.17 bre. -0.28`	OXY	chainID: C, resSeq: 2201, molecule: OXYGEN MOLECULE