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PyDISH No: 03414

PDB: 2d2c,
chainID: P, resSeq: 301
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.8 Å
origomeric count: 16

axial ligand #1: TYR

chainID: P,
resSeq: 1,
Coordination distance[Å]: 2.302
molecule: Apocytochrome f
Organism: Mastigocladus laminosus

List of other hemes in pdb:2d2c

ID of heme	Distortion	Axial ligands on heme		Function & structure
2d2c-A-301	`sad. -0.00 ruf. +0.01 dom. -0.01 bre. -0.20`	HIS	chainID: A, resSeq: 86, molecule: Cytochrome b6	electron transporter oligomeric count: 16 pocket vol.: 437.0 Å³ d(Fe-oop): 0.010 Å
2d2c-A-301	`sad. -0.00 ruf. +0.01 dom. -0.01 bre. -0.20`	HIS	chainID: A, resSeq: 187, molecule: Cytochrome b6
2d2c-A-302	`sad. -0.14 ruf. -0.03 dom. +0.12 bre. -0.16`	HIS	chainID: A, resSeq: 100, molecule: Cytochrome b6	electron transporter oligomeric count: 16 pocket vol.: 471.0 Å³ d(Fe-oop): 0.042 Å
2d2c-A-302	`sad. -0.14 ruf. -0.03 dom. +0.12 bre. -0.16`	HIS	chainID: A, resSeq: 202, molecule: Cytochrome b6
2d2c-A-303	`sad. -0.04 ruf. -0.19 dom. -0.23 bre. -0.28`	HOH	chainID: A, resSeq: 304, molecule: water	electron transporter oligomeric count: 16 pocket vol.: 758.0 Å³ d(Fe-oop): 0.061 Å
2d2c-A-303	`sad. -0.04 ruf. -0.19 dom. -0.23 bre. -0.28`	Not assigned.
2d2c-C-301	`sad. -0.05 ruf. -0.01 dom. +0.01 bre. -0.35`	TYR	chainID: C, resSeq: 1, molecule: Apocytochrome f	electron transporter oligomeric count: 16 pocket vol.: 411.0 Å³ d(Fe-oop): 0.015 Å
2d2c-C-301	`sad. -0.05 ruf. -0.01 dom. +0.01 bre. -0.35`	Not assigned.
2d2c-N-301	`sad. -0.01 ruf. +0.01 dom. +0.07 bre. -0.23`	HIS	chainID: N, resSeq: 86, molecule: Cytochrome b6	electron transporter oligomeric count: 16 pocket vol.: 426.0 Å³ d(Fe-oop): 0.039 Å
2d2c-N-301	`sad. -0.01 ruf. +0.01 dom. +0.07 bre. -0.23`	HIS	chainID: N, resSeq: 187, molecule: Cytochrome b6
2d2c-N-302	`sad. -0.23 ruf. -0.04 dom. +0.07 bre. -0.19`	HIS	chainID: N, resSeq: 100, molecule: Cytochrome b6	electron transporter oligomeric count: 16 pocket vol.: 461.0 Å³ d(Fe-oop): 0.010 Å
2d2c-N-302	`sad. -0.23 ruf. -0.04 dom. +0.07 bre. -0.19`	HIS	chainID: N, resSeq: 202, molecule: Cytochrome b6
2d2c-N-303	`sad. +0.28 ruf. -0.12 dom. -0.22 bre. -0.15`	HOH	chainID: N, resSeq: 1306, molecule: water	electron transporter oligomeric count: 16 pocket vol.: 642.0 Å³ d(Fe-oop): 0.064 Å
2d2c-N-303	`sad. +0.28 ruf. -0.12 dom. -0.22 bre. -0.15`	Not assigned.