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PyDISH No: 03364

PDB: 2cth,
chainID: B, resSeq: 110
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.67 Å

axial ligand #1: HIS

chainID: B,
resSeq: 35,
Coordination distance[Å]: 1.95
molecule: CYTOCHROME C3
Organism: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

axial ligand #2: HIS

chainID: B,
resSeq: 52,
Coordination distance[Å]: 1.987
molecule: same as ligand #1

List of other hemes in pdb:2cth

ID of heme Distortion Axial ligands on heme Function & structure
2cth-A-109
sad. +0.96
ruf. +0.32
dom. +0.01
bre. -0.11
HIS chainID: A,
resSeq: 70,
molecule: CYTOCHROME C3
electron transporter
oligomeric count: 1
pocket vol.: 398.0 Å3
d(Fe-oop): 0.017 Å
HIS chainID: A, resSeq: 106,
molecule: CYTOCHROME C3
2cth-A-110
sad. +0.14
ruf. -0.63
dom. -0.21
bre. -0.13
HIS chainID: A,
resSeq: 35,
molecule: CYTOCHROME C3
electron transporter
oligomeric count: 1
pocket vol.: 544.0 Å3
d(Fe-oop): 0.046 Å
HIS chainID: A, resSeq: 52,
molecule: CYTOCHROME C3
2cth-A-111
sad. +0.08
ruf. -0.78
dom. -0.20
bre. -0.12
HIS chainID: A,
resSeq: 22,
molecule: CYTOCHROME C3
electron transporter
oligomeric count: 1
pocket vol.: 494.0 Å3
d(Fe-oop): 0.038 Å
HIS chainID: A, resSeq: 34,
molecule: CYTOCHROME C3
2cth-A-112
sad. +0.35
ruf. -0.28
dom. -0.07
bre. -0.14
HIS chainID: A,
resSeq: 25,
molecule: CYTOCHROME C3
electron transporter
oligomeric count: 1
pocket vol.: 540.0 Å3
d(Fe-oop): 0.007 Å
HIS chainID: A, resSeq: 83,
molecule: CYTOCHROME C3
2cth-B-109
sad. +0.94
ruf. +0.32
dom. -0.04
bre. -0.10
HIS chainID: B,
resSeq: 70,
molecule: CYTOCHROME C3
electron transporter
oligomeric count: 1
pocket vol.: 394.0 Å3
d(Fe-oop): 0.011 Å
HIS chainID: B, resSeq: 106,
molecule: CYTOCHROME C3
2cth-B-111
sad. +0.27
ruf. -0.68
dom. -0.21
bre. -0.10
HIS chainID: B,
resSeq: 22,
molecule: CYTOCHROME C3
electron transporter
oligomeric count: 1
pocket vol.: 487.0 Å3
d(Fe-oop): 0.011 Å
HIS chainID: B, resSeq: 34,
molecule: CYTOCHROME C3
2cth-B-112
sad. +0.44
ruf. -0.22
dom. -0.08
bre. -0.16
HIS chainID: B,
resSeq: 25,
molecule: CYTOCHROME C3
electron transporter
oligomeric count: 1
pocket vol.: 530.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: B, resSeq: 83,
molecule: CYTOCHROME C3