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PyDISH No: 03244

PDB: 29xz,
chainID: C, resSeq: 501
heme type: C

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 2.16 Å
origomeric count: 6

axial ligand #1: HIS

chainID: C,
resSeq: 38,
Coordination distance[Å]: 2.156
molecule: Cytochrome c1
Organism: Rhodobacter capsulatus SB 1003

axial ligand #2: MET

chainID: C,
resSeq: 183,
Coordination distance[Å]: 2.265
molecule: same as ligand #1

List of other hemes in pdb:29xz

ID of heme Distortion Axial ligands on heme Function & structure
29xz-B-501
 sad. +0.00
ruf. +0.27
dom. +0.12
bre. -0.18
 HIS chainID: B,
resSeq: 97,
molecule: Cytochrome b		 electron transporter
oligomeric count: 6
pocket vol.: 473.0 Å3
d(Fe-oop): 0.007 Å
HIS chainID: B, resSeq: 198,
molecule: Cytochrome b
29xz-B-502
 sad. -0.42
ruf. -0.46
dom. +0.22
bre. -0.15
 HIS chainID: B,
resSeq: 111,
molecule: Cytochrome b		 electron transporter
oligomeric count: 6
pocket vol.: 488.0 Å3
d(Fe-oop): 0.025 Å
HIS chainID: B, resSeq: 212,
molecule: Cytochrome b
29xz-E-501
 sad. +0.00
ruf. +0.27
dom. +0.12
bre. -0.18
 HIS chainID: E,
resSeq: 97,
molecule: Cytochrome b		 electron transporter
oligomeric count: 6
pocket vol.: 487.0 Å3
d(Fe-oop): 0.006 Å
HIS chainID: E, resSeq: 198,
molecule: Cytochrome b
29xz-E-502
 sad. -0.42
ruf. -0.46
dom. +0.22
bre. -0.15
 HIS chainID: E,
resSeq: 111,
molecule: Cytochrome b		 electron transporter
oligomeric count: 6
pocket vol.: 482.0 Å3
d(Fe-oop): 0.025 Å
HIS chainID: E, resSeq: 212,
molecule: Cytochrome b
29xz-F-501
 sad. +0.32
ruf. -0.57
dom. -0.25
bre. -0.20
 HIS chainID: F,
resSeq: 38,
molecule: Cytochrome c1		 electron transporter
oligomeric count: 6
pocket vol.: 487.0 Å3
d(Fe-oop): 0.020 Å
MET chainID: F, resSeq: 183,
molecule: Cytochrome c1