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PyDISH No: 03009

PDB: 1yhr,
chainID: D, resSeq: 147
heme type: B

distortion

Protein data

function: oxygen carrier
experiment: X-RAY DIFFRACTION
resolution: 2.6 Å

axial ligand #1: HIS

chainID: D,
resSeq: 92,
Coordination distance[Å]: 2.074
molecule: Hemoglobin beta chain
Organism: Homo sapiens

axial ligand #2: OXY

chainID: D,
resSeq: 150,
Coordination distance[Å]: 1.721
molecule: OXYGEN MOLECULE

List of other hemes in pdb:1yhr

ID of heme Distortion Axial ligands on heme Function & structure
1yhr-A-142
sad. -0.08
ruf. -0.25
dom. -0.11
bre. +0.12
HIS chainID: A,
resSeq: 87,
molecule: Hemoglobin alpha chain
oxygen carrier
oligomeric count: 4
pocket vol.: 558.0 Å3
d(Fe-oop): 0.170 Å
OXY chainID: A, resSeq: 150,
molecule: OXYGEN MOLECULE
1yhr-B-147
sad. +0.00
ruf. +0.48
dom. -0.50
bre. +0.10
HIS chainID: B,
resSeq: 92,
molecule: Hemoglobin beta chain
oxygen carrier
oligomeric count: 4
pocket vol.: 588.0 Å3
d(Fe-oop): 0.418 Å
OXY chainID: B, resSeq: 150,
molecule: OXYGEN MOLECULE
1yhr-C-142
sad. +0.23
ruf. -0.14
dom. -0.26
bre. +0.15
HIS chainID: C,
resSeq: 87,
molecule: Hemoglobin alpha chain
oxygen carrier
oligomeric count: 4
pocket vol.: 542.0 Å3
d(Fe-oop): 0.090 Å
OXY chainID: C, resSeq: 150,
molecule: OXYGEN MOLECULE