Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 02983

PDB: 1yff,
chainID: D, resSeq: 347
heme type: B

distortion

Protein data

function: oxygen carrier
experiment: X-RAY DIFFRACTION
resolution: 2.4 Å

axial ligand #1: HIS

chainID: D,
resSeq: 92,
Coordination distance[Å]: 2.062
molecule: Hemoglobin beta chain
Organism: Homo sapiens

axial ligand #2: CMO

chainID: D,
resSeq: 348,
Coordination distance[Å]: 1.782
molecule: CARBON MONOXIDE

List of other hemes in pdb:1yff

ID of heme	Distortion	Axial ligands on heme		Function & structure
1yff-A-142	`sad. +0.08 ruf. -0.35 dom. -0.26 bre. +0.12`	HIS	chainID: A, resSeq: 87, molecule: Hemoglobin alpha chain	oxygen carrier oligomeric count: 4 pocket vol.: 543.0 Å³ d(Fe-oop): 0.022 Å
1yff-A-142	`sad. +0.08 ruf. -0.35 dom. -0.26 bre. +0.12`	CMO	chainID: A, resSeq: 143, molecule: CARBON MONOXIDE
1yff-B-347	`sad. +0.33 ruf. -0.41 dom. -0.22 bre. +0.10`	HIS	chainID: B, resSeq: 92, molecule: Hemoglobin beta chain	oxygen carrier oligomeric count: 4 pocket vol.: 563.0 Å³ d(Fe-oop): 0.003 Å
1yff-B-347	`sad. +0.33 ruf. -0.41 dom. -0.22 bre. +0.10`	CMO	chainID: B, resSeq: 348, molecule: CARBON MONOXIDE
1yff-C-142	`sad. +0.06 ruf. -0.33 dom. -0.28 bre. +0.11`	HIS	chainID: C, resSeq: 87, molecule: Hemoglobin alpha chain	oxygen carrier oligomeric count: 4 pocket vol.: 528.0 Å³ d(Fe-oop): 0.025 Å
1yff-C-142	`sad. +0.06 ruf. -0.33 dom. -0.28 bre. +0.11`	CMO	chainID: C, resSeq: 143, molecule: CARBON MONOXIDE
1yff-E-142	`sad. +0.31 ruf. -0.36 dom. -0.19 bre. +0.14`	HIS	chainID: E, resSeq: 87, molecule: Hemoglobin alpha chain	oxygen carrier oligomeric count: 4 pocket vol.: 532.0 Å³ d(Fe-oop): 0.024 Å
1yff-E-142	`sad. +0.31 ruf. -0.36 dom. -0.19 bre. +0.14`	CMO	chainID: E, resSeq: 143, molecule: CARBON MONOXIDE
1yff-F-347	`sad. +0.40 ruf. -0.35 dom. -0.21 bre. +0.06`	HIS	chainID: F, resSeq: 92, molecule: Hemoglobin beta chain	oxygen carrier oligomeric count: 4 pocket vol.: 545.0 Å³ d(Fe-oop): 0.016 Å
1yff-F-347	`sad. +0.40 ruf. -0.35 dom. -0.21 bre. +0.06`	CMO	chainID: F, resSeq: 348, molecule: CARBON MONOXIDE
1yff-G-142	`sad. +0.22 ruf. -0.27 dom. -0.20 bre. +0.12`	HIS	chainID: G, resSeq: 87, molecule: Hemoglobin alpha chain	oxygen carrier oligomeric count: 4 pocket vol.: 540.0 Å³ d(Fe-oop): 0.007 Å
1yff-G-142	`sad. +0.22 ruf. -0.27 dom. -0.20 bre. +0.12`	CMO	chainID: G, resSeq: 143, molecule: CARBON MONOXIDE
1yff-H-347	`sad. +0.38 ruf. -0.36 dom. -0.26 bre. +0.08`	HIS	chainID: H, resSeq: 92, molecule: Hemoglobin beta chain	oxygen carrier oligomeric count: 4 pocket vol.: 562.0 Å³ d(Fe-oop): 0.023 Å
1yff-H-347	`sad. +0.38 ruf. -0.36 dom. -0.26 bre. +0.08`	CMO	chainID: H, resSeq: 348, molecule: CARBON MONOXIDE