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PyDISH No: 02942

PDB: 1ydz,
chainID: B, resSeq: 147
heme type: B

distortion

Protein data

function: oxygen carrier
experiment: X-RAY DIFFRACTION
resolution: 3.3 Å

axial ligand #1: HIS

chainID: B,
resSeq: 92,
Coordination distance[Å]: 2.274
molecule: Hemoglobin beta chain
Organism: Homo sapiens

axial ligand #2: OXY

chainID: B,
resSeq: 150,
Coordination distance[Å]: 1.754
molecule: OXYGEN MOLECULE

List of other hemes in pdb:1ydz

ID of heme Distortion Axial ligands on heme Function & structure
1ydz-A-142
sad. +0.01
ruf. -0.30
dom. -0.42
bre. -0.11
HIS chainID: A,
resSeq: 87,
molecule: Hemoglobin alpha chain
oxygen carrier
oligomeric count: 4
pocket vol.: 545.0 Å3
d(Fe-oop): 0.132 Å
OXY chainID: A, resSeq: 150,
molecule: OXYGEN MOLECULE
1ydz-C-142
sad. +0.27
ruf. -0.36
dom. -0.52
bre. -0.07
HIS chainID: C,
resSeq: 87,
molecule: Hemoglobin alpha chain
oxygen carrier
oligomeric count: 4
pocket vol.: 511.0 Å3
d(Fe-oop): 0.127 Å
OXY chainID: C, resSeq: 150,
molecule: OXYGEN MOLECULE
1ydz-D-147
sad. +0.29
ruf. +0.08
dom. -0.39
bre. -0.08
HIS chainID: D,
resSeq: 92,
molecule: Hemoglobin beta chain
oxygen carrier
oligomeric count: 4
pocket vol.: 551.0 Å3
d(Fe-oop): 0.215 Å
OXY chainID: D, resSeq: 150,
molecule: OXYGEN MOLECULE