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PyDISH No: 02928

PDB: 1y8k,
chainID: A, resSeq: 142
heme type: B

distortion

Protein data

function: oxygen carrier
experiment: X-RAY DIFFRACTION
resolution: 2.3 Å

axial ligand #1: HIS

chainID: A,
resSeq: 87,
Coordination distance[Å]: 2.155
molecule: Hemoglobin alpha chains
Organism: Equus caballus

axial ligand #2: HOH

chainID: A,
resSeq: 900,
Coordination distance[Å]: 2.138
molecule: water

List of other hemes in pdb:1y8k

ID of heme Distortion Axial ligands on heme Function & structure
1y8k-B-147
sad. +0.33
ruf. -0.18
dom. -0.18
bre. -0.20
HIS chainID: B,
resSeq: 92,
molecule: Hemoglobin beta chain
oxygen carrier
oligomeric count: 4
pocket vol.: 573.0 Å3
d(Fe-oop): 0.002 Å
HOH chainID: B, resSeq: 901,
molecule: water
1y8k-C-142
sad. +0.16
ruf. -0.25
dom. -0.23
bre. -0.11
HIS chainID: C,
resSeq: 87,
molecule: Hemoglobin alpha chains
oxygen carrier
oligomeric count: 4
pocket vol.: 525.0 Å3
d(Fe-oop): 0.067 Å
HOH chainID: C, resSeq: 902,
molecule: water
1y8k-D-147
sad. +0.29
ruf. -0.39
dom. -0.16
bre. -0.14
HIS chainID: D,
resSeq: 92,
molecule: Hemoglobin beta chain
oxygen carrier
oligomeric count: 4
pocket vol.: 587.0 Å3
d(Fe-oop): 0.016 Å
HOH chainID: D, resSeq: 903,
molecule: water