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PyDISH No: 02813

PDB: 1y0p,
chainID: A, resSeq: 803
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.5 Å

axial ligand #1: HIS

chainID: A,
resSeq: 58,
Coordination distance[Å]: 2.041
molecule: Fumarate reductase flavoprotein subunit
EC number: 1.3.99.1
Organism: Shewanella frigidimarina

axial ligand #2: HIS

chainID: A,
resSeq: 72,
Coordination distance[Å]: 2.063
molecule: same as ligand #1

List of other hemes in pdb:1y0p

ID of heme Distortion Axial ligands on heme Function & structure
1y0p-A-801
sad. -0.20
ruf. -0.76
dom. -0.00
bre. -0.04
HIS chainID: A,
resSeq: 18,
molecule: Fumarate reductase flavoprotein subunit
oxidoreductase
oligomeric count: 1
pocket vol.: 551.0 Å3
d(Fe-oop): 0.018 Å
HIS chainID: A, resSeq: 75,
molecule: Fumarate reductase flavoprotein subunit
1y0p-A-802
sad. -0.15
ruf. -1.19
dom. -0.02
bre. +0.02
HIS chainID: A,
resSeq: 8,
molecule: Fumarate reductase flavoprotein subunit
oxidoreductase
oligomeric count: 1
pocket vol.: 560.0 Å3
d(Fe-oop): 0.017 Å
HIS chainID: A, resSeq: 40,
molecule: Fumarate reductase flavoprotein subunit
1y0p-A-804
sad. +0.81
ruf. -0.27
dom. -0.18
bre. -0.05
HIS chainID: A,
resSeq: 61,
molecule: Fumarate reductase flavoprotein subunit
oxidoreductase
oligomeric count: 1
pocket vol.: 444.0 Å3
d(Fe-oop): 0.022 Å
HIS chainID: A, resSeq: 86,
molecule: Fumarate reductase flavoprotein subunit