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PyDISH No: 02648

PDB: 1vrn,
chainID: C, resSeq: 403
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.2 Å

axial ligand #1: MET

chainID: C,
resSeq: 233,
Coordination distance[Å]: 2.163
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Blastochloris viridis

axial ligand #2: HIS

chainID: C,
resSeq: 248,
Coordination distance[Å]: 1.993
molecule: same as ligand #1

List of other hemes in pdb:1vrn

ID of heme Distortion Axial ligands on heme Function & structure
1vrn-C-401
sad. +0.65
ruf. -0.13
dom. -0.08
bre. -0.18
MET chainID: C,
resSeq: 74,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 4
pocket vol.: 359.0 Å3
d(Fe-oop): 0.002 Å
HIS chainID: C, resSeq: 91,
molecule: Photosynthetic reaction center cytochrome c subunit
1vrn-C-402
sad. +0.40
ruf. -0.37
dom. -0.04
bre. -0.18
MET chainID: C,
resSeq: 110,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 4
pocket vol.: 341.0 Å3
d(Fe-oop): 0.005 Å
HIS chainID: C, resSeq: 136,
molecule: Photosynthetic reaction center cytochrome c subunit
1vrn-C-404
sad. +0.23
ruf. -0.27
dom. -0.05
bre. -0.17
HIS chainID: C,
resSeq: 124,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 4
pocket vol.: 342.0 Å3
d(Fe-oop): 0.006 Å
HIS chainID: C, resSeq: 309,
molecule: Photosynthetic reaction center cytochrome c subunit