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PyDISH No: 02398

PDB: 1s6v,
chainID: D, resSeq: 104
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.88 Å

axial ligand #1: HIS

chainID: D,
resSeq: 18,
Coordination distance[Å]: 2.046
molecule: Cytochrome c, iso-1
Organism: Saccharomyces cerevisiae

axial ligand #2: MET

chainID: D,
resSeq: 80,
Coordination distance[Å]: 2.14
molecule: same as ligand #1

List of other hemes in pdb:1s6v

ID of heme Distortion Axial ligands on heme Function & structure
1s6v-A-296
sad. -0.57
ruf. +0.25
dom. +0.09
bre. -0.08
HIS chainID: A,
resSeq: 175,
molecule: Cytochrome c peroxidase, mitochondrial
oxidoreductase
oligomeric count: 2
pocket vol.: 431.0 Å3
d(Fe-oop): 0.209 Å
Not assigned.
1s6v-B-104
sad. -0.33
ruf. -0.82
dom. +0.03
bre. +0.01
HIS chainID: B,
resSeq: 18,
molecule: Cytochrome c, iso-1
electron transporter
oligomeric count: 2
pocket vol.: 327.0 Å3
d(Fe-oop): 0.094 Å
MET chainID: B, resSeq: 80,
molecule: Cytochrome c, iso-1
1s6v-C-296
sad. -0.62
ruf. +0.12
dom. +0.04
bre. -0.10
HIS chainID: C,
resSeq: 175,
molecule: Cytochrome c peroxidase, mitochondrial
oxidoreductase
oligomeric count: 2
pocket vol.: 424.0 Å3
d(Fe-oop): 0.197 Å
HOH chainID: C, resSeq: 409,
molecule: water