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Protein data
function: oxidoreductaseexperiment: X-RAY DIFFRACTION
resolution: 1.9 Å
axial ligand #1: LYS
chainID: B,resSeq: 133,
Coordination distance[Å]: 1.939
molecule: CYTOCHROME C NITRITE REDUCTASE
Organism: Sulfurospirillum deleyianum
axial ligand #2: SO4
chainID: B,resSeq: 1502,
Coordination distance[Å]: 2.043
molecule: SULFATE ION
List of other hemes in pdb:1qdb
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
1qdb-A-515 |
sad. +0.59 ruf. -0.53 dom. +0.14 bre. +0.06 |
LYS | chainID: A, resSeq: 133, molecule: CYTOCHROME C NITRITE REDUCTASE |
oxidoreductase oligomeric count: 2 pocket vol.: 429.0 Å3 d(Fe-oop): 0.083 Å |
| SO4 | chainID: A, resSeq: 1501, molecule: SULFATE ION |
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1qdb-A-516 |
sad. +0.79 ruf. -0.94 dom. -0.15 bre. +0.02 |
HIS | chainID: A, resSeq: 171, molecule: CYTOCHROME C NITRITE REDUCTASE |
oxidoreductase oligomeric count: 2 pocket vol.: 416.0 Å3 d(Fe-oop): 0.005 Å |
| HIS | chainID: A, resSeq: 318, molecule: CYTOCHROME C NITRITE REDUCTASE |
|||
1qdb-A-517 |
sad. -0.45 ruf. -1.12 dom. +0.21 bre. +0.08 |
HIS | chainID: A, resSeq: 101, molecule: CYTOCHROME C NITRITE REDUCTASE |
oxidoreductase oligomeric count: 2 pocket vol.: 374.0 Å3 d(Fe-oop): 0.011 Å |
| HIS | chainID: A, resSeq: 214, molecule: CYTOCHROME C NITRITE REDUCTASE |
|||
1qdb-A-518 |
sad. +0.44 ruf. -0.94 dom. +0.21 bre. +0.12 |
HIS | chainID: A, resSeq: 304, molecule: CYTOCHROME C NITRITE REDUCTASE |
oxidoreductase oligomeric count: 2 pocket vol.: 455.0 Å3 d(Fe-oop): 0.009 Å |
| HIS | chainID: A, resSeq: 411, molecule: CYTOCHROME C NITRITE REDUCTASE |
|||
1qdb-A-519 |
sad. +0.29 ruf. -0.61 dom. -0.01 bre. -0.05 |
HIS | chainID: A, resSeq: 293, molecule: CYTOCHROME C NITRITE REDUCTASE |
oxidoreductase oligomeric count: 2 pocket vol.: 459.0 Å3 d(Fe-oop): 0.013 Å |
| HIS | chainID: A, resSeq: 336, molecule: CYTOCHROME C NITRITE REDUCTASE |
|||
1qdb-B-516 |
sad. +0.73 ruf. -0.78 dom. -0.18 bre. +0.12 |
HIS | chainID: B, resSeq: 171, molecule: CYTOCHROME C NITRITE REDUCTASE |
oxidoreductase oligomeric count: 2 pocket vol.: 412.0 Å3 d(Fe-oop): 0.010 Å |
| HIS | chainID: B, resSeq: 318, molecule: CYTOCHROME C NITRITE REDUCTASE |
|||
1qdb-B-517 |
sad. -0.40 ruf. -1.03 dom. +0.21 bre. -0.01 |
HIS | chainID: B, resSeq: 101, molecule: CYTOCHROME C NITRITE REDUCTASE |
oxidoreductase oligomeric count: 2 pocket vol.: 377.0 Å3 d(Fe-oop): 0.004 Å |
| HIS | chainID: B, resSeq: 214, molecule: CYTOCHROME C NITRITE REDUCTASE |
|||
1qdb-B-518 |
sad. +0.37 ruf. -1.04 dom. +0.25 bre. +0.13 |
HIS | chainID: B, resSeq: 304, molecule: CYTOCHROME C NITRITE REDUCTASE |
oxidoreductase oligomeric count: 2 pocket vol.: 445.0 Å3 d(Fe-oop): 0.005 Å |
| HIS | chainID: B, resSeq: 411, molecule: CYTOCHROME C NITRITE REDUCTASE |
|||
1qdb-B-519 |
sad. +0.37 ruf. -0.76 dom. +0.00 bre. +0.09 |
HIS | chainID: B, resSeq: 293, molecule: CYTOCHROME C NITRITE REDUCTASE |
oxidoreductase oligomeric count: 2 pocket vol.: 450.0 Å3 d(Fe-oop): 0.014 Å |
| HIS | chainID: B, resSeq: 336, molecule: CYTOCHROME C NITRITE REDUCTASE |
|||
1qdb-C-515 |
sad. +0.62 ruf. -0.58 dom. +0.15 bre. -0.05 |
LYS | chainID: C, resSeq: 133, molecule: CYTOCHROME C NITRITE REDUCTASE |
oxidoreductase oligomeric count: 2 pocket vol.: 457.0 Å3 d(Fe-oop): 0.036 Å |
| SO4 | chainID: C, resSeq: 1503, molecule: SULFATE ION |
|||
1qdb-C-516 |
sad. +0.73 ruf. -0.74 dom. -0.14 bre. +0.06 |
HIS | chainID: C, resSeq: 171, molecule: CYTOCHROME C NITRITE REDUCTASE |
oxidoreductase oligomeric count: 2 pocket vol.: 399.0 Å3 d(Fe-oop): 0.037 Å |
| HIS | chainID: C, resSeq: 318, molecule: CYTOCHROME C NITRITE REDUCTASE |
|||
1qdb-C-517 |
sad. -0.44 ruf. -0.98 dom. +0.23 bre. +0.08 |
HIS | chainID: C, resSeq: 101, molecule: CYTOCHROME C NITRITE REDUCTASE |
oxidoreductase oligomeric count: 2 pocket vol.: 364.0 Å3 d(Fe-oop): 0.026 Å |
| HIS | chainID: C, resSeq: 214, molecule: CYTOCHROME C NITRITE REDUCTASE |
|||
1qdb-C-518 |
sad. +0.43 ruf. -0.96 dom. +0.17 bre. +0.07 |
HIS | chainID: C, resSeq: 304, molecule: CYTOCHROME C NITRITE REDUCTASE |
oxidoreductase oligomeric count: 2 pocket vol.: 427.0 Å3 d(Fe-oop): 0.003 Å |
| HIS | chainID: C, resSeq: 411, molecule: CYTOCHROME C NITRITE REDUCTASE |
|||
1qdb-C-519 |
sad. +0.40 ruf. -0.61 dom. -0.06 bre. +0.11 |
HIS | chainID: C, resSeq: 293, molecule: CYTOCHROME C NITRITE REDUCTASE |
oxidoreductase oligomeric count: 2 pocket vol.: 501.0 Å3 d(Fe-oop): 0.012 Å |
| HIS | chainID: C, resSeq: 336, molecule: CYTOCHROME C NITRITE REDUCTASE |
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