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PyDISH No: 02167

PDB: 1ppj,
chainID: C, resSeq: 502
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.1 Å

axial ligand #1: HIS

chainID: C,
resSeq: 97,
Coordination distance[Å]: 2.003
molecule: Cytochrome b
EC number: 1.10.2.2
Organism: Bos taurus

axial ligand #2: HIS

chainID: C,
resSeq: 196,
Coordination distance[Å]: 2.01
molecule: same as ligand #1

List of other hemes in pdb:1ppj

ID of heme Distortion Axial ligands on heme Function & structure
1ppj-C-501
sad. +0.12
ruf. -0.11
dom. -0.12
bre. -0.12
HIS chainID: C,
resSeq: 83,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 401.0 Å3
d(Fe-oop): 0.019 Å
HIS chainID: C, resSeq: 182,
molecule: Cytochrome b
1ppj-D-501
sad. -0.22
ruf. -0.26
dom. -0.17
bre. -0.09
HIS chainID: D,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
oxidoreductase
oligomeric count: 20
pocket vol.: 405.0 Å3
d(Fe-oop): 0.002 Å
MET chainID: D, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial
1ppj-P-501
sad. +0.11
ruf. -0.12
dom. -0.11
bre. -0.15
HIS chainID: P,
resSeq: 83,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 402.0 Å3
d(Fe-oop): 0.032 Å
HIS chainID: P, resSeq: 182,
molecule: Cytochrome b
1ppj-P-502
sad. -0.71
ruf. -0.37
dom. +0.15
bre. -0.11
HIS chainID: P,
resSeq: 97,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 391.0 Å3
d(Fe-oop): 0.002 Å
HIS chainID: P, resSeq: 196,
molecule: Cytochrome b
1ppj-Q-501
sad. -0.22
ruf. -0.23
dom. -0.19
bre. +0.01
HIS chainID: Q,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
oxidoreductase
oligomeric count: 20
pocket vol.: 432.0 Å3
d(Fe-oop): 0.016 Å
MET chainID: Q, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial