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PyDISH No: 02162

PDB: 1pp9,
chainID: D, resSeq: 501
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.1 Å

axial ligand #1: HIS

chainID: D,
resSeq: 41,
Coordination distance[Å]: 1.994
molecule: Cytochrome c1, heme protein, mitochondrial
EC number: 1.10.2.2
Organism: Bos taurus

axial ligand #2: MET

chainID: D,
resSeq: 160,
Coordination distance[Å]: 2.103
molecule: same as ligand #1

List of other hemes in pdb:1pp9

ID of heme Distortion Axial ligands on heme Function & structure
1pp9-C-501
sad. +0.25
ruf. -0.05
dom. -0.14
bre. -0.15
HIS chainID: C,
resSeq: 83,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 409.0 Å3
d(Fe-oop): 0.003 Å
HIS chainID: C, resSeq: 182,
molecule: Cytochrome b
1pp9-C-502
sad. -0.77
ruf. -0.41
dom. +0.21
bre. -0.14
HIS chainID: C,
resSeq: 97,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 375.0 Å3
d(Fe-oop): 0.005 Å
HIS chainID: C, resSeq: 196,
molecule: Cytochrome b
1pp9-P-501
sad. +0.16
ruf. -0.28
dom. -0.08
bre. -0.11
HIS chainID: P,
resSeq: 83,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 404.0 Å3
d(Fe-oop): 0.048 Å
HIS chainID: P, resSeq: 182,
molecule: Cytochrome b
1pp9-P-502
sad. -0.76
ruf. -0.43
dom. +0.06
bre. -0.13
HIS chainID: P,
resSeq: 97,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 389.0 Å3
d(Fe-oop): 0.037 Å
HIS chainID: P, resSeq: 196,
molecule: Cytochrome b
1pp9-Q-501
sad. -0.22
ruf. -0.45
dom. -0.23
bre. +0.08
HIS chainID: Q,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial
oxidoreductase
oligomeric count: 20
pocket vol.: 412.0 Å3
d(Fe-oop): 0.017 Å
MET chainID: Q, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial