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PyDISH No: 02099

PDB: 1p2h,
chainID: A, resSeq: 804
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.1 Å

axial ligand #1: HIS

chainID: A,
resSeq: 86,
Coordination distance[Å]: 1.847
molecule: flavocytochrome c3
EC number: 1.3.99.1
Organism: Shewanella frigidimarina

axial ligand #2: HOH

chainID: A,
resSeq: 1351,
Coordination distance[Å]: 2.102
molecule: water

List of other hemes in pdb:1p2h

ID of heme Distortion Axial ligands on heme Function & structure
1p2h-A-801
sad. -0.31
ruf. -1.12
dom. +0.48
bre. +0.06
HIS chainID: A,
resSeq: 18,
molecule: flavocytochrome c3
oxidoreductase
oligomeric count: 1
pocket vol.: 541.0 Å3
d(Fe-oop): 0.139 Å
HIS chainID: A, resSeq: 75,
molecule: flavocytochrome c3
1p2h-A-802
sad. -0.21
ruf. -1.17
dom. +0.37
bre. +0.15
HIS chainID: A,
resSeq: 8,
molecule: flavocytochrome c3
oxidoreductase
oligomeric count: 1
pocket vol.: 540.0 Å3
d(Fe-oop): 0.344 Å
HIS chainID: A, resSeq: 40,
molecule: flavocytochrome c3
1p2h-A-803
sad. +0.14
ruf. -0.93
dom. +0.42
bre. +0.02
HIS chainID: A,
resSeq: 58,
molecule: flavocytochrome c3
oxidoreductase
oligomeric count: 1
pocket vol.: 475.0 Å3
d(Fe-oop): 0.030 Å
HIS chainID: A, resSeq: 72,
molecule: flavocytochrome c3