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PyDISH No: 01734

PDB: 1mdv,
chainID: B, resSeq: 113
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.3 Å

axial ligand #1: HIS

chainID: B,
resSeq: 70,
Coordination distance[Å]: 2.02
molecule: CYTOCHROME C3
Organism: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

axial ligand #2: HIS

chainID: B,
resSeq: 106,
Coordination distance[Å]: 1.964
molecule: same as ligand #1

List of other hemes in pdb:1mdv

ID of heme	Distortion	Axial ligands on heme		Function & structure
1mdv-A-110	`sad. -0.14 ruf. -1.12 dom. -0.20 bre. +0.03`	HIS	chainID: A, resSeq: 22, molecule: CYTOCHROME C3	electron transporter oligomeric count: 1 pocket vol.: 570.0 Å³ d(Fe-oop): 0.113 Å
1mdv-A-110	`sad. -0.14 ruf. -1.12 dom. -0.20 bre. +0.03`	HIS	chainID: A, resSeq: 34, molecule: CYTOCHROME C3
1mdv-A-111	`sad. +0.17 ruf. -0.68 dom. -0.17 bre. -0.12`	HIS	chainID: A, resSeq: 35, molecule: CYTOCHROME C3	electron transporter oligomeric count: 1 pocket vol.: 541.0 Å³ d(Fe-oop): 0.050 Å
1mdv-A-111	`sad. +0.17 ruf. -0.68 dom. -0.17 bre. -0.12`	HIS	chainID: A, resSeq: 52, molecule: CYTOCHROME C3
1mdv-A-112	`sad. +0.42 ruf. -0.01 dom. -0.03 bre. -0.06`	HIS	chainID: A, resSeq: 25, molecule: CYTOCHROME C3	electron transporter oligomeric count: 1 pocket vol.: 596.0 Å³ d(Fe-oop): 0.033 Å
1mdv-A-112	`sad. +0.42 ruf. -0.01 dom. -0.03 bre. -0.06`	HIS	chainID: A, resSeq: 83, molecule: CYTOCHROME C3
1mdv-A-113	`sad. +0.62 ruf. +0.32 dom. +0.15 bre. -0.21`	HIS	chainID: A, resSeq: 70, molecule: CYTOCHROME C3	electron transporter oligomeric count: 1 pocket vol.: 503.0 Å³ d(Fe-oop): 0.021 Å
1mdv-A-113	`sad. +0.62 ruf. +0.32 dom. +0.15 bre. -0.21`	HIS	chainID: A, resSeq: 106, molecule: CYTOCHROME C3
1mdv-B-110	`sad. -0.31 ruf. -0.81 dom. -0.06 bre. -0.16`	HIS	chainID: B, resSeq: 22, molecule: CYTOCHROME C3	electron transporter oligomeric count: 1 pocket vol.: 546.0 Å³ d(Fe-oop): 0.015 Å
1mdv-B-110	`sad. -0.31 ruf. -0.81 dom. -0.06 bre. -0.16`	HIS	chainID: B, resSeq: 34, molecule: CYTOCHROME C3
1mdv-B-111	`sad. +0.18 ruf. -0.66 dom. -0.23 bre. -0.04`	HIS	chainID: B, resSeq: 35, molecule: CYTOCHROME C3	electron transporter oligomeric count: 1 pocket vol.: 545.0 Å³ d(Fe-oop): 0.006 Å
1mdv-B-111	`sad. +0.18 ruf. -0.66 dom. -0.23 bre. -0.04`	HIS	chainID: B, resSeq: 52, molecule: CYTOCHROME C3
1mdv-B-112	`sad. +0.05 ruf. -0.26 dom. -0.15 bre. -0.06`	HIS	chainID: B, resSeq: 25, molecule: CYTOCHROME C3	electron transporter oligomeric count: 1 pocket vol.: 609.0 Å³ d(Fe-oop): 0.016 Å
1mdv-B-112	`sad. +0.05 ruf. -0.26 dom. -0.15 bre. -0.06`	HIS	chainID: B, resSeq: 83, molecule: CYTOCHROME C3