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PyDISH No: 01660

PDB: 1m64,
chainID: A, resSeq: 803
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.8 Å

axial ligand #1: HIS

chainID: A,
resSeq: 58,
Coordination distance[Å]: 2.153
molecule: flavocytochrome c3
EC number: 1.3.99.1
Organism: Shewanella frigidimarina

axial ligand #2: HIS

chainID: A,
resSeq: 72,
Coordination distance[Å]: 2.193
molecule: same as ligand #1

List of other hemes in pdb:1m64

ID of heme Distortion Axial ligands on heme Function & structure
1m64-A-801
sad. -0.08
ruf. -0.87
dom. +0.20
bre. -0.09
HIS chainID: A,
resSeq: 18,
molecule: flavocytochrome c3
oxidoreductase
oligomeric count: 1
pocket vol.: 599.0 Å3
d(Fe-oop): 0.116 Å
HIS chainID: A, resSeq: 75,
molecule: flavocytochrome c3
1m64-A-802
sad. -0.11
ruf. -1.26
dom. +0.12
bre. -0.01
HIS chainID: A,
resSeq: 8,
molecule: flavocytochrome c3
oxidoreductase
oligomeric count: 1
pocket vol.: 574.0 Å3
d(Fe-oop): 0.049 Å
HIS chainID: A, resSeq: 40,
molecule: flavocytochrome c3
1m64-A-804
sad. +0.79
ruf. -0.28
dom. +0.03
bre. -0.09
HIS chainID: A,
resSeq: 61,
molecule: flavocytochrome c3
oxidoreductase
oligomeric count: 1
pocket vol.: 490.0 Å3
d(Fe-oop): 0.036 Å
HIS chainID: A, resSeq: 86,
molecule: flavocytochrome c3
1m64-B-801
sad. -0.04
ruf. -0.93
dom. +0.29
bre. -0.09
HIS chainID: B,
resSeq: 18,
molecule: flavocytochrome c3
oxidoreductase
oligomeric count: 1
pocket vol.: 614.0 Å3
d(Fe-oop): 0.064 Å
HIS chainID: B, resSeq: 75,
molecule: flavocytochrome c3
1m64-B-802
sad. -0.15
ruf. -1.24
dom. +0.18
bre. -0.02
HIS chainID: B,
resSeq: 8,
molecule: flavocytochrome c3
oxidoreductase
oligomeric count: 1
pocket vol.: 589.0 Å3
d(Fe-oop): 0.012 Å
HIS chainID: B, resSeq: 40,
molecule: flavocytochrome c3
1m64-B-803
sad. +0.23
ruf. -0.84
dom. +0.33
bre. -0.06
HIS chainID: B,
resSeq: 58,
molecule: flavocytochrome c3
oxidoreductase
oligomeric count: 1
pocket vol.: 539.0 Å3
d(Fe-oop): 0.084 Å
HIS chainID: B, resSeq: 72,
molecule: flavocytochrome c3
1m64-B-804
sad. +0.74
ruf. -0.27
dom. +0.04
bre. -0.12
HIS chainID: B,
resSeq: 61,
molecule: flavocytochrome c3
oxidoreductase
oligomeric count: 1
pocket vol.: 486.0 Å3
d(Fe-oop): 0.085 Å
HIS chainID: B, resSeq: 86,
molecule: flavocytochrome c3