Browser

PyDISH No: 01490

PDB: 1ksu,
chainID: A, resSeq: 803
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.0 Å

axial ligand #1: HIS

chainID: A,
resSeq: 58,
Coordination distance[Å]: 2.036
molecule: flavocytochrome c
EC number: 1.3.99.1
Organism: Shewanella frigidimarina

axial ligand #2: HIS

chainID: A,
resSeq: 72,
Coordination distance[Å]: 2.059
molecule: same as ligand #1

List of other hemes in pdb:1ksu

ID of heme Distortion Axial ligands on heme Function & structure
1ksu-A-801
sad. -0.12
ruf. -0.77
dom. +0.28
bre. -0.06
HIS chainID: A,
resSeq: 18,
molecule: flavocytochrome c
oxidoreductase
oligomeric count: 1
pocket vol.: 559.0 Å3
d(Fe-oop): 0.129 Å
HIS chainID: A, resSeq: 75,
molecule: flavocytochrome c
1ksu-A-802
sad. -0.14
ruf. -1.20
dom. +0.13
bre. +0.03
HIS chainID: A,
resSeq: 8,
molecule: flavocytochrome c
oxidoreductase
oligomeric count: 1
pocket vol.: 535.0 Å3
d(Fe-oop): 0.038 Å
HIS chainID: A, resSeq: 40,
molecule: flavocytochrome c
1ksu-A-804
sad. +0.89
ruf. -0.27
dom. +0.11
bre. -0.05
HIS chainID: A,
resSeq: 61,
molecule: flavocytochrome c
oxidoreductase
oligomeric count: 1
pocket vol.: 449.0 Å3
d(Fe-oop): 0.043 Å
HIS chainID: A, resSeq: 86,
molecule: flavocytochrome c
1ksu-B-801
sad. -0.08
ruf. -0.91
dom. +0.30
bre. -0.03
HIS chainID: B,
resSeq: 18,
molecule: flavocytochrome c
oxidoreductase
oligomeric count: 1
pocket vol.: 560.0 Å3
d(Fe-oop): 0.052 Å
HIS chainID: B, resSeq: 75,
molecule: flavocytochrome c
1ksu-B-802
sad. -0.11
ruf. -1.30
dom. +0.13
bre. +0.05
HIS chainID: B,
resSeq: 8,
molecule: flavocytochrome c
oxidoreductase
oligomeric count: 1
pocket vol.: 517.0 Å3
d(Fe-oop): 0.002 Å
HIS chainID: B, resSeq: 40,
molecule: flavocytochrome c
1ksu-B-803
sad. +0.24
ruf. -0.83
dom. +0.36
bre. +0.02
HIS chainID: B,
resSeq: 58,
molecule: flavocytochrome c
oxidoreductase
oligomeric count: 1
pocket vol.: 486.0 Å3
d(Fe-oop): 0.135 Å
HIS chainID: B, resSeq: 72,
molecule: flavocytochrome c
1ksu-B-804
sad. +0.85
ruf. -0.26
dom. +0.04
bre. -0.05
HIS chainID: B,
resSeq: 61,
molecule: flavocytochrome c
oxidoreductase
oligomeric count: 1
pocket vol.: 446.0 Å3
d(Fe-oop): 0.045 Å
HIS chainID: B, resSeq: 86,
molecule: flavocytochrome c