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PyDISH No: 01397

PDB: 1jry,
chainID: A, resSeq: 802
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.0 Å

axial ligand #1: HIS

chainID: A,
resSeq: 8,
Coordination distance[Å]: 2.152
molecule: FLAVOCYTOCHROME C
EC number: 1.3.99.1
Organism: Shewanella frigidimarina

axial ligand #2: HIS

chainID: A,
resSeq: 40,
Coordination distance[Å]: 2.001
molecule: same as ligand #1

List of other hemes in pdb:1jry

ID of heme	Distortion	Axial ligands on heme		Function & structure
1jry-A-801	`sad. -0.10 ruf. -0.74 dom. +0.23 bre. -0.06`	HIS	chainID: A, resSeq: 18, molecule: FLAVOCYTOCHROME C	oxidoreductase oligomeric count: 1 pocket vol.: 545.0 Å³ d(Fe-oop): 0.085 Å
1jry-A-801	`sad. -0.10 ruf. -0.74 dom. +0.23 bre. -0.06`	HIS	chainID: A, resSeq: 75, molecule: FLAVOCYTOCHROME C
1jry-A-803	`sad. +0.12 ruf. -0.81 dom. +0.34 bre. +0.01`	HIS	chainID: A, resSeq: 58, molecule: FLAVOCYTOCHROME C	oxidoreductase oligomeric count: 1 pocket vol.: 461.0 Å³ d(Fe-oop): 0.057 Å
1jry-A-803	`sad. +0.12 ruf. -0.81 dom. +0.34 bre. +0.01`	HIS	chainID: A, resSeq: 72, molecule: FLAVOCYTOCHROME C
1jry-A-804	`sad. +0.94 ruf. -0.24 dom. +0.04 bre. +0.02`	HIS	chainID: A, resSeq: 61, molecule: FLAVOCYTOCHROME C	oxidoreductase oligomeric count: 1 pocket vol.: 450.0 Å³ d(Fe-oop): 0.022 Å
1jry-A-804	`sad. +0.94 ruf. -0.24 dom. +0.04 bre. +0.02`	HIS	chainID: A, resSeq: 86, molecule: FLAVOCYTOCHROME C
1jry-B-801	`sad. -0.08 ruf. -0.89 dom. +0.22 bre. -0.03`	HIS	chainID: B, resSeq: 18, molecule: FLAVOCYTOCHROME C	oxidoreductase oligomeric count: 1 pocket vol.: 550.0 Å³ d(Fe-oop): 0.085 Å
1jry-B-801	`sad. -0.08 ruf. -0.89 dom. +0.22 bre. -0.03`	HIS	chainID: B, resSeq: 75, molecule: FLAVOCYTOCHROME C
1jry-B-802	`sad. -0.04 ruf. -1.29 dom. +0.06 bre. +0.07`	HIS	chainID: B, resSeq: 8, molecule: FLAVOCYTOCHROME C	oxidoreductase oligomeric count: 1 pocket vol.: 551.0 Å³ d(Fe-oop): 0.009 Å
1jry-B-802	`sad. -0.04 ruf. -1.29 dom. +0.06 bre. +0.07`	HIS	chainID: B, resSeq: 40, molecule: FLAVOCYTOCHROME C
1jry-B-803	`sad. +0.26 ruf. -0.92 dom. +0.35 bre. +0.00`	HIS	chainID: B, resSeq: 58, molecule: FLAVOCYTOCHROME C	oxidoreductase oligomeric count: 1 pocket vol.: 475.0 Å³ d(Fe-oop): 0.080 Å
1jry-B-803	`sad. +0.26 ruf. -0.92 dom. +0.35 bre. +0.00`	HIS	chainID: B, resSeq: 72, molecule: FLAVOCYTOCHROME C
1jry-B-804	`sad. +0.76 ruf. -0.26 dom. +0.10 bre. -0.07`	HIS	chainID: B, resSeq: 61, molecule: FLAVOCYTOCHROME C	oxidoreductase oligomeric count: 1 pocket vol.: 442.0 Å³ d(Fe-oop): 0.009 Å
1jry-B-804	`sad. +0.76 ruf. -0.26 dom. +0.10 bre. -0.07`	HIS	chainID: B, resSeq: 86, molecule: FLAVOCYTOCHROME C