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PyDISH No: 01391

PDB: 1jrx,
chainID: A, resSeq: 804
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.0 Å

axial ligand #1: HIS

chainID: A,
resSeq: 61,
Coordination distance[Å]: 2.019
molecule: FLAVOCYTOCHROME C
EC number: 1.3.99.1
Organism: Shewanella frigidimarina

axial ligand #2: HIS

chainID: A,
resSeq: 86,
Coordination distance[Å]: 2.061
molecule: same as ligand #1

List of other hemes in pdb:1jrx

ID of heme Distortion Axial ligands on heme Function & structure
1jrx-A-801
sad. -0.09
ruf. -0.75
dom. +0.33
bre. -0.01
HIS chainID: A,
resSeq: 18,
molecule: FLAVOCYTOCHROME C
oxidoreductase
oligomeric count: 1
pocket vol.: 513.0 Å3
d(Fe-oop): 0.128 Å
HIS chainID: A, resSeq: 75,
molecule: FLAVOCYTOCHROME C
1jrx-A-802
sad. -0.20
ruf. -1.29
dom. +0.24
bre. +0.11
HIS chainID: A,
resSeq: 8,
molecule: FLAVOCYTOCHROME C
oxidoreductase
oligomeric count: 1
pocket vol.: 483.0 Å3
d(Fe-oop): 0.073 Å
HIS chainID: A, resSeq: 40,
molecule: FLAVOCYTOCHROME C
1jrx-A-803
sad. +0.17
ruf. -0.89
dom. +0.32
bre. +0.04
HIS chainID: A,
resSeq: 58,
molecule: FLAVOCYTOCHROME C
oxidoreductase
oligomeric count: 1
pocket vol.: 436.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: A, resSeq: 72,
molecule: FLAVOCYTOCHROME C
1jrx-B-801
sad. -0.09
ruf. -1.04
dom. +0.24
bre. +0.04
HIS chainID: B,
resSeq: 18,
molecule: FLAVOCYTOCHROME C
oxidoreductase
oligomeric count: 1
pocket vol.: 542.0 Å3
d(Fe-oop): 0.044 Å
HIS chainID: B, resSeq: 75,
molecule: FLAVOCYTOCHROME C
1jrx-B-802
sad. -0.02
ruf. -1.47
dom. +0.29
bre. +0.14
HIS chainID: B,
resSeq: 8,
molecule: FLAVOCYTOCHROME C
oxidoreductase
oligomeric count: 1
pocket vol.: 503.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: B, resSeq: 40,
molecule: FLAVOCYTOCHROME C
1jrx-B-803
sad. +0.26
ruf. -0.85
dom. +0.38
bre. +0.06
HIS chainID: B,
resSeq: 58,
molecule: FLAVOCYTOCHROME C
oxidoreductase
oligomeric count: 1
pocket vol.: 459.0 Å3
d(Fe-oop): 0.098 Å
HIS chainID: B, resSeq: 72,
molecule: FLAVOCYTOCHROME C
1jrx-B-804
sad. +0.79
ruf. -0.16
dom. +0.05
bre. -0.02
HIS chainID: B,
resSeq: 61,
molecule: FLAVOCYTOCHROME C
oxidoreductase
oligomeric count: 1
pocket vol.: 426.0 Å3
d(Fe-oop): 0.021 Å
HIS chainID: B, resSeq: 86,
molecule: FLAVOCYTOCHROME C