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PyDISH No: 01304

PDB: 1j0p,
chainID: A, resSeq: 1002
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 0.91 Å

axial ligand #1: HIS

chainID: A,
resSeq: 35,
Coordination distance[Å]: 2.006
molecule: Cytochrome c3
Organism: Desulfovibrio vulgaris

axial ligand #2: HIS

chainID: A,
resSeq: 52,
Coordination distance[Å]: 1.979
molecule: same as ligand #1

List of other hemes in pdb:1j0p

ID of heme Distortion Axial ligands on heme Function & structure
1j0p-A-1004
sad. +1.03
ruf. +0.34
dom. +0.06
bre. +0.01
HIS chainID: A,
resSeq: 70,
molecule: Cytochrome c3
electron transporter
oligomeric count: 1
pocket vol.: 399.0 Å3
d(Fe-oop): 0.002 Å
HIS chainID: A, resSeq: 106,
molecule: Cytochrome c3
1j0p-A-1001
sad. +0.04
ruf. -0.72
dom. -0.18
bre. -0.02
HIS chainID: A,
resSeq: 22,
molecule: Cytochrome c3
electron transporter
oligomeric count: 1
pocket vol.: 481.0 Å3
d(Fe-oop): 0.019 Å
HIS chainID: A, resSeq: 34,
molecule: Cytochrome c3
1j0p-A-1003
sad. +0.21
ruf. -0.34
dom. -0.09
bre. -0.08
HIS chainID: A,
resSeq: 25,
molecule: Cytochrome c3
electron transporter
oligomeric count: 1
pocket vol.: 489.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: A, resSeq: 83,
molecule: Cytochrome c3