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PyDISH No: 01301

PDB: 1j0o,
chainID: A, resSeq: 1001
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.15 Å

axial ligand #1: HIS

chainID: A,
resSeq: 22,
Coordination distance[Å]: 1.992
molecule: Cytochrome c3
Organism: Desulfovibrio vulgaris

axial ligand #2: HIS

chainID: A,
resSeq: 34,
Coordination distance[Å]: 1.898
molecule: same as ligand #1

List of other hemes in pdb:1j0o

ID of heme Distortion Axial ligands on heme Function & structure
1j0o-A-1004
 sad. +1.07
ruf. +0.29
dom. +0.05
bre. -0.10
 HIS chainID: A,
resSeq: 70,
molecule: Cytochrome c3		 electron transporter
oligomeric count: 1
pocket vol.: 394.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: A, resSeq: 106,
molecule: Cytochrome c3
1j0o-A-1002
 sad. +0.21
ruf. -0.72
dom. -0.09
bre. -0.15
 HIS chainID: A,
resSeq: 35,
molecule: Cytochrome c3		 electron transporter
oligomeric count: 1
pocket vol.: 509.0 Å3
d(Fe-oop): 0.026 Å
HIS chainID: A, resSeq: 52,
molecule: Cytochrome c3
1j0o-A-1003
 sad. +0.19
ruf. -0.27
dom. -0.09
bre. -0.21
 HIS chainID: A,
resSeq: 25,
molecule: Cytochrome c3		 electron transporter
oligomeric count: 1
pocket vol.: 501.0 Å3
d(Fe-oop): 0.007 Å
HIS chainID: A, resSeq: 83,
molecule: Cytochrome c3