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PyDISH No: 01300

PDB: 1j0o,
chainID: A, resSeq: 1002
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.15 Å

axial ligand #1: HIS

chainID: A,
resSeq: 35,
Coordination distance[Å]: 2.031
molecule: Cytochrome c3
Organism: Desulfovibrio vulgaris

axial ligand #2: HIS

chainID: A,
resSeq: 52,
Coordination distance[Å]: 1.997
molecule: same as ligand #1

List of other hemes in pdb:1j0o

ID of heme Distortion Axial ligands on heme Function & structure
1j0o-A-1004
sad. +1.07
ruf. +0.29
dom. +0.05
bre. -0.10
HIS chainID: A,
resSeq: 70,
molecule: Cytochrome c3
electron transporter
oligomeric count: 1
pocket vol.: 394.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: A, resSeq: 106,
molecule: Cytochrome c3
1j0o-A-1001
sad. +0.30
ruf. -0.77
dom. -0.19
bre. -0.19
HIS chainID: A,
resSeq: 22,
molecule: Cytochrome c3
electron transporter
oligomeric count: 1
pocket vol.: 447.0 Å3
d(Fe-oop): 0.051 Å
HIS chainID: A, resSeq: 34,
molecule: Cytochrome c3
1j0o-A-1003
sad. +0.19
ruf. -0.27
dom. -0.09
bre. -0.21
HIS chainID: A,
resSeq: 25,
molecule: Cytochrome c3
electron transporter
oligomeric count: 1
pocket vol.: 501.0 Å3
d(Fe-oop): 0.007 Å
HIS chainID: A, resSeq: 83,
molecule: Cytochrome c3