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PyDISH No: 01061

PDB: 1h31,
chainID: E, resSeq: 1263
heme type: C

distortion

Protein data

function: transferase
experiment: X-RAY DIFFRACTION
resolution: 2.55 Å

axial ligand #1: HIS

chainID: E,
resSeq: 181,
Coordination distance[Å]: 2.074
molecule: DIHEME CYTOCHROME C
Organism: RHODOVULUM SULFIDOPHILUM

axial ligand #2: CSS

chainID: E,
resSeq: 222,
Coordination distance[Å]: 2.256
molecule: same as ligand #1

List of other hemes in pdb:1h31

ID of heme Distortion Axial ligands on heme Function & structure
1h31-A-1262
sad. +0.17
ruf. -0.11
dom. +0.00
bre. -0.12
HIS chainID: A,
resSeq: 80,
molecule: DIHEME CYTOCHROME C
transferase
oligomeric count: 2
pocket vol.: 474.0 Å3
d(Fe-oop): 0.001 Å
CYS chainID: A, resSeq: 114,
molecule: DIHEME CYTOCHROME C
1h31-A-1263
sad. +0.22
ruf. -0.12
dom. -0.05
bre. -0.09
HIS chainID: A,
resSeq: 181,
molecule: DIHEME CYTOCHROME C
transferase
oligomeric count: 2
pocket vol.: 396.0 Å3
d(Fe-oop): 0.013 Å
CSS chainID: A, resSeq: 222,
molecule: DIHEME CYTOCHROME C
1h31-B-1139
sad. +0.09
ruf. -0.09
dom. -0.10
bre. -0.06
HIS chainID: B,
resSeq: 46,
molecule: CYTOCHROME C
electron transporter
oligomeric count: 2
pocket vol.: 367.0 Å3
d(Fe-oop): 0.027 Å
MET chainID: B, resSeq: 92,
molecule: CYTOCHROME C
1h31-C-1262
sad. +0.14
ruf. -0.10
dom. -0.03
bre. -0.10
HIS chainID: C,
resSeq: 80,
molecule: DIHEME CYTOCHROME C
transferase
oligomeric count: 2
pocket vol.: 468.0 Å3
d(Fe-oop): 0.010 Å
CYS chainID: C, resSeq: 114,
molecule: DIHEME CYTOCHROME C
1h31-C-1263
sad. +0.18
ruf. -0.11
dom. -0.05
bre. -0.08
HIS chainID: C,
resSeq: 181,
molecule: DIHEME CYTOCHROME C
transferase
oligomeric count: 2
pocket vol.: 407.0 Å3
d(Fe-oop): 0.013 Å
CSS chainID: C, resSeq: 222,
molecule: DIHEME CYTOCHROME C
1h31-D-1139
sad. +0.09
ruf. -0.11
dom. -0.12
bre. -0.05
HIS chainID: D,
resSeq: 46,
molecule: CYTOCHROME C
electron transporter
oligomeric count: 2
pocket vol.: 352.0 Å3
d(Fe-oop): 0.041 Å
MET chainID: D, resSeq: 92,
molecule: CYTOCHROME C
1h31-E-1262
sad. +0.11
ruf. -0.08
dom. -0.01
bre. -0.08
HIS chainID: E,
resSeq: 80,
molecule: DIHEME CYTOCHROME C
transferase
oligomeric count: 2
pocket vol.: 473.0 Å3
d(Fe-oop): 0.005 Å
CYS chainID: E, resSeq: 114,
molecule: DIHEME CYTOCHROME C
1h31-F-1139
sad. +0.04
ruf. -0.08
dom. -0.09
bre. -0.08
HIS chainID: F,
resSeq: 46,
molecule: CYTOCHROME C
electron transporter
oligomeric count: 2
pocket vol.: 360.0 Å3
d(Fe-oop): 0.024 Å
MET chainID: F, resSeq: 92,
molecule: CYTOCHROME C
1h31-G-1262
sad. +0.12
ruf. -0.09
dom. -0.03
bre. -0.07
HIS chainID: G,
resSeq: 80,
molecule: DIHEME CYTOCHROME C
transferase
oligomeric count: 2
pocket vol.: 475.0 Å3
d(Fe-oop): 0.011 Å
CYS chainID: G, resSeq: 114,
molecule: DIHEME CYTOCHROME C
1h31-G-1263
sad. +0.19
ruf. -0.10
dom. -0.03
bre. -0.13
HIS chainID: G,
resSeq: 181,
molecule: DIHEME CYTOCHROME C
transferase
oligomeric count: 2
pocket vol.: 392.0 Å3
d(Fe-oop): 0.013 Å
CSS chainID: G, resSeq: 222,
molecule: DIHEME CYTOCHROME C
1h31-H-1139
sad. +0.09
ruf. -0.08
dom. -0.07
bre. -0.11
HIS chainID: H,
resSeq: 46,
molecule: CYTOCHROME C
electron transporter
oligomeric count: 2
pocket vol.: 363.0 Å3
d(Fe-oop): 0.015 Å
MET chainID: H, resSeq: 92,
molecule: CYTOCHROME C