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PyDISH No: 00737

PDB: 1fcd,
chainID: D, resSeq: 902
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.53 Å

axial ligand #1: HIS

chainID: D,
resSeq: 105,
Coordination distance[Å]: 2.135
molecule: FLAVOCYTOCHROME C SULFIDE DEHYDROGENASE (CYTOCHROME SUBUNIT)
Organism: Allochromatium vinosum

axial ligand #2: MET

chainID: D,
resSeq: 147,
Coordination distance[Å]: 2.311
molecule: same as ligand #1

List of other hemes in pdb:1fcd

ID of heme Distortion Axial ligands on heme Function & structure
1fcd-C-901
sad. -0.12
ruf. -0.17
dom. +0.06
bre. +0.08
HIS chainID: C,
resSeq: 15,
molecule: FLAVOCYTOCHROME C SULFIDE DEHYDROGENASE (CYTOCHROME SUBUNIT)
electron transporter
oligomeric count: 2
pocket vol.: 338.0 Å3
d(Fe-oop): 0.083 Å
MET chainID: C, resSeq: 54,
molecule: FLAVOCYTOCHROME C SULFIDE DEHYDROGENASE (CYTOCHROME SUBUNIT)
1fcd-C-902
sad. +0.32
ruf. -0.52
dom. +0.11
bre. +0.10
HIS chainID: C,
resSeq: 105,
molecule: FLAVOCYTOCHROME C SULFIDE DEHYDROGENASE (CYTOCHROME SUBUNIT)
electron transporter
oligomeric count: 2
pocket vol.: 477.0 Å3
d(Fe-oop): 0.116 Å
MET chainID: C, resSeq: 147,
molecule: FLAVOCYTOCHROME C SULFIDE DEHYDROGENASE (CYTOCHROME SUBUNIT)
1fcd-D-901
sad. +0.12
ruf. -0.09
dom. +0.22
bre. +0.08
HIS chainID: D,
resSeq: 15,
molecule: FLAVOCYTOCHROME C SULFIDE DEHYDROGENASE (CYTOCHROME SUBUNIT)
electron transporter
oligomeric count: 2
pocket vol.: 335.0 Å3
d(Fe-oop): 0.154 Å
MET chainID: D, resSeq: 54,
molecule: FLAVOCYTOCHROME C SULFIDE DEHYDROGENASE (CYTOCHROME SUBUNIT)