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PyDISH No: 00579

PDB: 1dxr,
chainID: C, resSeq: 402
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.0 Å

axial ligand #1: MET

chainID: C,
resSeq: 110,
Coordination distance[Å]: 2.224
molecule: PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT
Organism: RHODOPSEUDOMONAS VIRIDIS

axial ligand #2: HIS

chainID: C,
resSeq: 136,
Coordination distance[Å]: 1.977
molecule: same as ligand #1

List of other hemes in pdb:1dxr

ID of heme Distortion Axial ligands on heme Function & structure
1dxr-C-401
 sad. +0.49
ruf. -0.29
dom. -0.03
bre. -0.16
 MET chainID: C,
resSeq: 74,
molecule: PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT		 electron transporter
oligomeric count: 4
pocket vol.: 341.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: C, resSeq: 91,
molecule: PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT
1dxr-C-403
 sad. +0.36
ruf. -0.53
dom. +0.04
bre. -0.13
 MET chainID: C,
resSeq: 233,
molecule: PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT		 electron transporter
oligomeric count: 4
pocket vol.: 313.0 Å3
d(Fe-oop): 0.014 Å
HIS chainID: C, resSeq: 248,
molecule: PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT
1dxr-C-404
 sad. +0.22
ruf. -0.17
dom. -0.04
bre. -0.18
 HIS chainID: C,
resSeq: 124,
molecule: PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT		 electron transporter
oligomeric count: 4
pocket vol.: 353.0 Å3
d(Fe-oop): 0.010 Å
HIS chainID: C, resSeq: 309,
molecule: PHOTOSYNTHETIC REACTION CENTER CYTOCHROME C SUBUNIT