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PyDISH No: 00452

PDB: 1d4e,
chainID: A, resSeq: 601
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.8 Å

axial ligand #1: HIS

chainID: A,
resSeq: 63,
Coordination distance[Å]: 1.917
molecule: FLAVOCYTOCHROME C FUMARATE REDUCTASE
EC number: 1.3.99.1
Organism: Shewanella oneidensis

axial ligand #2: HIS

chainID: A,
resSeq: 88,
Coordination distance[Å]: 2.035
molecule: same as ligand #1

List of other hemes in pdb:1d4e

ID of heme Distortion Axial ligands on heme Function & structure
1d4e-A-602
 sad. +0.05
ruf. -1.11
dom. +0.04
bre. +0.04
 HIS chainID: A,
resSeq: 60,
molecule: FLAVOCYTOCHROME C FUMARATE REDUCTASE		 oxidoreductase
oligomeric count: 1
pocket vol.: 482.0 Å3
d(Fe-oop): 0.142 Å
HIS chainID: A, resSeq: 74,
molecule: FLAVOCYTOCHROME C FUMARATE REDUCTASE
1d4e-A-603
 sad. -0.01
ruf. -0.57
dom. +0.33
bre. +0.02
 HIS chainID: A,
resSeq: 19,
molecule: FLAVOCYTOCHROME C FUMARATE REDUCTASE		 oxidoreductase
oligomeric count: 1
pocket vol.: 520.0 Å3
d(Fe-oop): 0.029 Å
HIS chainID: A, resSeq: 77,
molecule: FLAVOCYTOCHROME C FUMARATE REDUCTASE
1d4e-A-604
 sad. +0.22
ruf. -1.17
dom. -0.15
bre. +0.02
 HIS chainID: A,
resSeq: 9,
molecule: FLAVOCYTOCHROME C FUMARATE REDUCTASE		 oxidoreductase
oligomeric count: 1
pocket vol.: 571.0 Å3
d(Fe-oop): 0.170 Å
HIS chainID: A, resSeq: 42,
molecule: FLAVOCYTOCHROME C FUMARATE REDUCTASE