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PyDISH No: 00449

PDB: 1d4d,
chainID: A, resSeq: 602
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.5 Å

axial ligand #1: HIS

chainID: A,
resSeq: 60,
Coordination distance[Å]: 2.037
molecule: FLAVOCYTOCHROME C FUMARATE REDUCTASE
EC number: 1.3.99.1
Organism: Shewanella oneidensis

axial ligand #2: HIS

chainID: A,
resSeq: 74,
Coordination distance[Å]: 2.043
molecule: same as ligand #1

List of other hemes in pdb:1d4d

ID of heme Distortion Axial ligands on heme Function & structure
1d4d-A-601
 sad. +0.32
ruf. -1.19
dom. -0.00
bre. -0.01
 HIS chainID: A,
resSeq: 63,
molecule: FLAVOCYTOCHROME C FUMARATE REDUCTASE		 oxidoreductase
oligomeric count: 1
pocket vol.: 465.0 Å3
d(Fe-oop): 0.019 Å
HIS chainID: A, resSeq: 88,
molecule: FLAVOCYTOCHROME C FUMARATE REDUCTASE
1d4d-A-603
 sad. -0.06
ruf. -0.60
dom. +0.35
bre. -0.02
 HIS chainID: A,
resSeq: 19,
molecule: FLAVOCYTOCHROME C FUMARATE REDUCTASE		 oxidoreductase
oligomeric count: 1
pocket vol.: 518.0 Å3
d(Fe-oop): 0.047 Å
HIS chainID: A, resSeq: 77,
molecule: FLAVOCYTOCHROME C FUMARATE REDUCTASE
1d4d-A-604
 sad. +0.24
ruf. -1.05
dom. -0.22
bre. -0.02
 HIS chainID: A,
resSeq: 9,
molecule: FLAVOCYTOCHROME C FUMARATE REDUCTASE		 oxidoreductase
oligomeric count: 1
pocket vol.: 581.0 Å3
d(Fe-oop): 0.058 Å
HIS chainID: A, resSeq: 42,
molecule: FLAVOCYTOCHROME C FUMARATE REDUCTASE